USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: PAXX_HUMAN

USC-OGP 2-DE database:  PAXX_HUMAN


General information about the entry
View entry in simple text format
Entry namePAXX_HUMAN
Primary accession numberQ9BUH6
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Protein PAXX {ECO:0000305}; AltName: Full=Paralog of XRCC4 and XLF {ECO:0000303|PubMed:25574025}; AltName: Full=XRCC4-like small protein {ECO:0000303|PubMed:25941166};.
Gene nameName=C9orf142 {ECO:0000312|HGNC:HGNC:27849}
Synonyms=PAXX {ECO:0000303|PubMed:25574025}, XLS {ECO:0000303|PubMed:25941166}
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

Homo sapiens (Human)
  map experimental info

pI=5.27; Mw=23825

UniProtKB/Swiss-ProtQ9BUH6; PAXX_HUMAN.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry namePAXX_HUMAN
Primary accession numberQ9BUH6
Secondary accession number(s) Q8IY19
Sequence was last modified on March 1, 2004 (version 2)
Annotations were last modified on March 15, 2017 (version 113)
Name and origin of the protein
DescriptionRecName: Full=Protein PAXX {ECO:0000305}; AltName: Full=Paralog of XRCC4 and XLF {ECO:0000303|PubMed:25574025}; AltName: Full=XRCC4-like small protein {ECO:0000303|PubMed:25941166};
Gene nameName=C9orf142 {ECO:0000312|HGNC:HGNC:27849}
Synonyms=PAXX {ECO:0000303|PubMed:25574025}, XLS {ECO:0000303|PubMed:25941166}
Encoded onName=C9orf142 {ECO:0000312|HGNC:HGNC:27849}; Synonyms=PAXX {ECO:0000303|PubMed:25574025}, XLS {ECO:0000303|PubMed:25941166
Keywords3D-structure; Alternative splicing; Complete proteome; DNA damage; DNA repair; Nucleus; Phosphoprotein; Reference proteome.
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
EMBLAL807752; CAI12761.1; -; Genomic_DNA
EMBLBC002613; AAH02613.2; -; mRNA
EMBLBC038191; AAH38191.1; -; mRNA
CCDSCCDS7020.1; -. [Q9BUH6-1]; .
RefSeqNP_899064.1; NM_183241.2. [Q9BUH6-1]; .
UniGeneHs.409582; -; .
PDB3WTD; X-ray; 2.35 A; A/B=1-166
PDB3WTF; X-ray; 3.45 A; A/B=1-204
PDB4WJA; X-ray; 2.60 A; A/B=1-145
PDBsum3WTD; -; .
PDBsum3WTF; -; .
PDBsum4WJA; -; .
ProteinModelPortalQ9BUH6; -; .
SMRQ9BUH6; -; .
BioGrid130343; 6; .
DIPDIP-61486N; -; .
IntActQ9BUH6; 4; .
iPTMnetQ9BUH6; -; .
PhosphoSitePlusQ9BUH6; -; .
BioMutaC9orf142; -; .
DMDM74752355; -; .
EPDQ9BUH6; -; .
MaxQBQ9BUH6; -; .
PaxDbQ9BUH6; -; .
PeptideAtlasQ9BUH6; -; .
DNASU286257; -; .
EnsemblENST00000371620; ENSP00000360682; ENSG00000148362. [Q9BUH6-1]; .
GeneID286257; -; .
KEGGhsa:286257; -; .
UCSCuc004cki.3; human. [Q9BUH6-1]; .
CTD286257; -; .
GeneCardsC9orf142; -; .
H-InvDBHIX0201397; -; .
HGNCHGNC:27849; C9orf142; .
HPAHPA045268; -; .
MIM616315; gene; .
neXtProtNX_Q9BUH6; -; .
OpenTargetsENSG00000148362; -; .
PharmGKBPA143485344; -; .
eggNOGENOG410IY9E; Eukaryota; .
eggNOGENOG410Y7F5; LUCA; .
GeneTreeENSGT00390000000543; -; .
HOGENOMHOG000294194; -; .
HOVERGENHBG101209; -; .
InParanoidQ9BUH6; -; .
OrthoDBEOG091G14JY; -; .
PhylomeDBQ9BUH6; -; .
TreeFamTF337247; -; .
GenomeRNAi286257; -; .
PROPR:Q9BUH6; -; .
ProteomesUP000005640; Chromosome 9; .
BgeeENSG00000148362; -; .
CleanExHS_C9orf142; -; .
GenevisibleQ9BUH6; HS; .
GOGO:0070062; C:extracellular exosome; IDA:UniProtKB; .
GOGO:0070419; C:nonhomologous end joining complex; IDA:UniProtKB; .
GOGO:0005634; C:nucleus; IDA:UniProtKB; .
GOGO:0035861; C:site of double-strand break; IDA:UniProtKB; .
GOGO:0032947; F:protein complex scaffold; IDA:UniProtKB; .
GOGO:0042803; F:protein homodimerization activity; IDA:UniProtKB; .
GOGO:0006974; P:cellular response to DNA damage stimulus; IDA:UniProtKB; .
GOGO:0051103; P:DNA ligation involved in DNA repair; IMP:UniProtKB; .
GOGO:0006303; P:double-strand break repair via nonhomologous end joining; IMP:UniProtKB; .
InterProIPR027873; PAXX; .
PfamPF15384; PAXX; 1; .

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Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server